Friday, January 4, 2008

Submitting a job to LSF job queue [2]: through CondorG with condor_submit

Now, I tried to submit the same job, pw.x with the remote input files through the CondorG command line which is condor_submit. In this example, I use inputfiles stored in my local machine. Therefore, my script file should specify input files like following lines.

executable = /home/teragrid/tg459282/vlab/pw.x
transfer_executable = false
should_transfer_files = yes
when_to_transfer_output = ON_EXIT
transfer_input_files = /home/leesangm/catalina/VLAB_Codes/__CC5f_7/008-O-ca--bm3.vdb,/home/leesangm/catalina/VLAB_Codes/__CC5f_7/__cc5_7,/home/leesangm/catalina/VLAB_Codes/__CC5f_7/Mg.vbc3

universe = grid
grid_resource = gt2
output = tmpfile.out.$(Cluster)
error = condorG.err.$(Cluster)
log = condorG.log.$(Cluster)
input = /home/leesangm/catalina/VLAB_Codes/__CC5f_7/Pwscf_Input

globusrsl = (queue=development)\
(environment=(PATH /usr/bin))\


This script file is almost the same with normal condor submit script except for the globusrsl keyword. This is a simple case for the serial job. For the parallel jobs, this should be modified.

Then submit condor job,
condor_submit script_file_name

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